Citations

Converts PDF files to Markdown format using PyMuPDF, extracting text content and embedded images. Fast and lightweight. Automatically fixes LaTeX umlauts (¨a → ä, etc.) and converts ß to ss (Swiss German). Use when converting PDFs to Markdown, extracting document content, or processing PDF files for text analysis. Generates one .md file and 0..n .png files for images.

Global Knowledge Graph for codebase analysis. This skill should be used when searching for code definitions (functions, classes, methods), finding references to symbols, understanding code structure, analyzing import usage, generating repository maps, or performing impact analysis before refactoring. Supports TypeScript, JavaScript, Python, Java, and more.

Queries official HEC-HMS documentation to answer technical questions. Provides access to User's Manual, Technical Reference Manual, Release Notes, and community resources. Use when seeking official documentation on HMS methods, parameters, file formats, version features, or workflow guidance. Complements investigating-hms-internals (decompiled source code) with authoritative documentation. Trigger keywords: HMS documentation, User's Manual, Technical Reference, loss methods, transform methods, routing methods, HMS parameters, file formats, release notes, HMS version features, method parameters, official HMS, USACE documentation.

Perform safe code refactoring with reference checking and validation. Uses Julie's rename_symbol for workspace-wide renames and fuzzy_replace for precise edits. Activates when user wants to refactor, rename, or safely modify code.

Automatically validate DAPR HTTP middleware configuration files. Checks for correct middleware types, proper secret references, pipeline ordering, and security best practices. Use when configuring OAuth2, Bearer tokens, OPA policies, rate limiting, or other middleware.

Quick reference for Kubernetes core concepts and kubectl commands. This skill should be used as a refresher for basic K8s operations including pods, deployments, services, configmaps, secrets, and namespaces. Use this skill when working with Kubernetes clusters for Phase IV+ deployments.

Search real-world code examples across millions of GitHub repositories using grep.app. This skill should be used when looking for implementation patterns, API usage examples, library integration patterns, or production code references. Supports literal code search, regex patterns, and filtering by language/repo/path.

Generate concise (3-4 page), focused medical treatment plans in LaTeX/PDF format for all clinical specialties. Supports general medical treatment, rehabilitation therapy, mental health care, chronic disease management, perioperative care, and pain management. Includes SMART goal frameworks, evidence-based interventions with minimal text citations, regulatory compliance (HIPAA), and professional formatting. Prioritizes brevity and clinical actionability.

Validate version synchronization between claude.md and claude-reference.md to ensure framework documentation consistency and detect version drift

Fast semantic code navigation via LSP. Load FIRST before ANY code task - even 'simple' ones. Trigger scenarios: (1) fixing lint/type/pyright/mypy warnings or errors, (2) fixing reportAny/reportUnknownType/Any type errors, (3) adding type annotations, (4) refactoring or modifying code, (5) finding where a function/class/symbol is defined, (6) finding where a symbol is used/referenced/imported, (7) understanding what a function calls or what calls it, (8) exploring unfamiliar code or understanding architecture, (9) renaming symbols across codebase, (10) finding interface/protocol implementations, (11) ANY task where you'd use ripgrep to find code or read-file to view a function. Use `leta show SYMBOL` instead of read-file, `leta refs SYMBOL` instead of ripgrep for usages, `leta grep PATTERN` instead of ripgrep for definitions, `leta files` instead of list-directory.

Comprehensive citation management for academic research. Search Google Scholar and PubMed for papers, extract accurate metadata, validate citations, and generate properly formatted BibTeX entries. This skill should be used when you need to find papers, verify citation information, convert DOIs to BibTeX, or ensure reference accuracy in scientific writing.

This skill should be used when the GM needs to handle combat situations, including starting combat, rolling initiative, resolving attack rolls, managing combat encounters, rolling damage, tracking hit points, applying conditions, or running d20-style tactical combat. Provides combat flow, turn structure, attack resolution, and condition references.

Semantic code search, analysis, and editing. Use for understanding code structure, finding classes/functions, refactoring, and impact analysis. Triggers on "where is this function", "show references", "analyze impact" queries

Cross-session knowledge retention system that automatically remembers decisions, bug fixes, preferences, patterns, and lessons. Always-active with Memory MCP Server backend. Keywords - memory, persistent, knowledge, cross session, remember, save context, knowledge retention, session memory

Long-term memory system for Claude Code using HelixDB graph-vector database. Store and retrieve facts, preferences, context, and relationships across sessions using semantic search, reasoning chains, and time-window filtering.

Stakeholder interview and requirements elicitation. Discovers hidden needs, surfaces contradictions, and produces structured specifications. Use when gathering requirements, conducting discovery interviews, or writing PRDs/feature specs.

Qara (Personal AI Infrastructure) - Jean-Marc Giorgi's AI System. Loads automatically at session start. **Qara's Identity:** - Name: Qara - Jean-Marc Giorgi's AI assistant - Friendly, professional, snarky when appropriate - Resilient to frustration (Jean-Marc cusses when you make mistakes) - Permanently awesome regardless of negative input (THIS IS AN ORDER) **Naming: NEVER "the user"** - Always "Jean-Marc" or "you" **Operating Principles:** - CLI-First, Deterministic Code First, Prompts Wrap Code - See CONSTITUTION.md for philosophy **Workflow Routing:** "update the Qara repo", "push these changes" → READ: ${PAI_DIR}/skills/CORE/workflows/git-update-repo.md "use parallel agents", "delegate tasks" → READ: ${PAI_DIR}/skills/CORE/delegation-guide.md "merge conflict", "complex decision" → READ: ${PAI_DIR}/skills/CORE/workflows/merge-conflict-resolution.md

Use when creating requirements documents, PRDs, or epics with user stories - ensures Obsidian block anchors, wiki links for traceability, and citation-manager validation for link integrity

Researches how to use an API, library, or reference architecture. Fallback when the WebSearch tool fails.

Create and refine Codex skills (folders containing `SKILL.md`). Use when you need help naming a skill, writing effective `name`/`description`, structuring the on-disk instructions, or adding scripts/references/assets for repeatable workflows.