Research

Maintain skills wiki health - check links, naming, cross-references, and coverage

Master microbiome data operations across Supabase, Neo4j, Upstash Vector, and Redis. Generates comprehensive BrilliantBiome reports with BrilliantScore calculations, species analysis, AMR assessments, and population insights. Use when querying microbiome data, generating reports, analyzing taxonomic relationships, or performing similarity searches across the two-lane architecture (clinical + research).

Quick reference for common Git commands and workflows. Use when working with version control, committing changes, managing branches, or resolving Git issues. Covers daily Git operations, branching strategies, and troubleshooting.

Dive into the Highrise Studio Lua API docs and answer questions.

Interactive UI theme generation when user needs help choosing colors/fonts.Generates cohesive themes based on brand personality using color harmony theory.Use when user asks for theme/color help OR building UI without design:- "What theme should I use?" "Help me pick colors" "Generate theme"- "What colors work well together?" "Suggest color palette"- User uncertain about design direction, needs aesthetic suggestions- Building UI/landing page with no design specs, needs complete themeKeywords: theme, color palette, colors, fonts, brand personality, color harmonyInteractive workflow: Ask personality → Present options → Generate custom theme.References pre-defined themes in .claude/themes/.Do NOT load for: User has clear aesthetic/colors, Figma/design file provided.Integrates with design-fundamentals: Generates themes following design principles.

Use when launching a new product end-to-end from market research through post-launch monitoring.Orchestrates 15+ specialist agents across 5 phases in a 10-week coordinated workflow includingresearch, development, marketing, sales preparation, launch execution, and ongoing optimization.Employs hierarchical coordination with parallel execution for efficiency and comprehensive coverage.

Review and improve English in daily journal entries. Use when the user wants to review their daily English practice with Japanese originals in `::ja` and `::en` sections.

Generate comprehensive implementation plans using Specification-Driven Development (SDD)methodology. Use when creating technical design, implementation roadmap, or executingthe /plan command.This skill orchestrates the plan-template.md execution flow, generating research, datamodels, API contracts, and test scenarios. It validates constitutional compliance(Library-First, Test-First, Contract-First) and prepares for task generation.Triggered by: /plan command, user request for "implementation plan", "technical design","how to implement", or "design this feature".

JASA/Biometrika manuscript structure with VanderWeele notation standards

Run D&D campaigns from published adventures using CandleKeep rulebooks. Acts as Dungeon Master, references adventure books, manages game state, and tracks session progress.

Research methodology and investigation best practices. Use when conducting interpretability investigations to ensure rigorous, unbiased exploration.

Testing patterns including pytest, unittest, mocking, fixtures, and test-driven development with extended thinking integration. Activate for test writing, coverage analysis, TDD, hypothesis-driven development, and quality assurance tasks.

World-class data science skill for statistical modeling, experimentation, causal inference, and advanced analytics. Expertise in Python (NumPy, Pandas, Scikit-learn), R, SQL, statistical methods, A/B testing, time series, and business intelligence. Includes experiment design, feature engineering, model evaluation, and stakeholder communication. Use when designing experiments, building predictive models, performing causal analysis, or driving data-driven decisions.

Reference for donut.party/system - component lifecycle and dependency injection library for Clojure. Use when working with component definitions, system management, refs between components, or lifecycle signals (start/stop/suspend/resume). Triggers on donut.system imports, ::ds/start, ::ds/stop, ::ds/config, ds/ref, or component-based architecture. Prefer using donut.system over mount, integrant, and stuart sierra's component.

Advanced swarm orchestration patterns for research, development, testing, and complex distributed workflows

Expert academic paper review including summary, methodology critique, and practical implications

Native macOS and Linux administration (non-WSL). Profile-aware - reads preferencesfrom ~/.admin/profiles/{hostname}.json.Use when: macOS/Linux system admin, Homebrew (macOS), apt (Linux), services.NOT for WSL - use admin-wsl instead.

Use this skill when creating, optimizing, or improving prompts for large language models. Applies when users need help designing effective prompts, selecting appropriate prompting techniques, or troubleshooting prompt performance. Provides expert guidance through conversational consulting to build prompts using research-backed best practices and proven patterns.

Workflow for long-running agentic development across multiple context windows. Use when working on multi-phase projects, complex feature implementations, or any development task spanning multiple sessions. Provides structured progress tracking, session handoff protocols, and incremental development patterns adapted from Anthropic's research on effective agent harnesses.

Expert on Shelby Protocol architecture, erasure coding, placement groups, read/write procedures, Clay Codes, chunking, storage providers, RPC servers, and decentralized storage system design on Aptos blockchain. Triggers on keywords Shelby Protocol, erasure coding, Clay Codes, placement groups, Shelby architecture, storage provider, blob storage, chunking, Shelby whitepaper.